Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809596.1_cds_XP_016495839.1_10121
CDS Infomation

[gene=LOC107814859] [db_xref=GeneID:107814859] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016495839.1] [location=complement(join(74091..75208,75802..75834,76737..77136))] [gbkey=CDS]
Sequence

ATGGCTAGTCAAATGGACATAATAGTGGGCAATCTTACCTTGTTCAGATGCAACAACAGT
CTAGACATCAATAGGGGCACGAATGATCACTATTTTCGTGACTATAAGAACTACACTGAA
TGTAGTGGCTTCAGCATTTACTACAAGTATCCGACAACATGGAGGGAAGGCTACTCGGAT
GCACCAGAGGGAGATATTCCTAATAACTGTTCACTTATTCAATTGCCAATCAAATGGAGG
TCACAACAGTTAACTCAAAATAGTAGCTTGTTTGATCTCTTAACCGCGAATTTTACAATT
CAGTGGAGCCTCTCTGATGATTGTAGTAAGTGTTACAATCAAGGAGGTCGATGTTTAACT
GACAGCAACAACAATTTTCTTTGTTCCTCCAATCCCAAAGTGAAGAGAAAGTCAAAACGA
ATTCTAGCTGCAGCCACAGCTTCTTCTATTGGTGGAGTCGTAATTCTGGTTATCCTACTC
CTGTACTTACAAACAAAATGCTCCCTTAATTCCATGATTTTCTGGAAGAAAAAAGGAGAG
GATTACAGAAATGTAAAGGACTTCCTTAAGAACTGTGGATCACTTGCTCCAAGAAATTAC
AGTTATCCTGAAGTCAAAAAGATGACCGAGTATTTCAAAAATAAACTTGGTCAAGGAGGC
TATGGTTGTGTGTACAAGGGAAAGTTGCATAACGGTACTCTTGTGGCAGTCAAGGTTTTG
AAGGAATCGAAGGGCGGGGGAGAAGAGTTTATCAACGAGGTGGCAAGTATCAGCAGGACT
TCTCACATTAATATTGTATCACTTGTGGGATTTTGTTTTGAGGGTCAAAACAAAGCTCTA
ATCTATGATTTCATGCCCAATGGATCCCTTGAGAAGTTCATTTACGACGCAAAATCAGGG
ACGAATCGTCAACTAGGATGGCAAACATTATACAATATTACACTTGGCATTGCTAGAGGA
TTGGAGTATTTGCATCGCGGTTGCAATACTCCAATCCTGCACTTCGATATAAAGCCTCAC
AACATTCTTCTGGATGAAGACTTTTGTCCAAAAATTTCTGAATTTGGCCTTGCAAAACTA
TGTAACAAGAAGGAAAGCATTGTATCTTTATTGGGGGCAAGAGGGACTATTGGATACATC
GCGCCAGAAATTGTGTGTAAAAACATTGGAGGAGTTTCTCACAAGTCAGATGTGTACAGC
TACGGTATGATGGTCCTCGAGATGGTTGGAGGAAGGAAAAATGTTGATGTTGCTGTTGAT
CGTACAAGTGAAATATACTTTCCACACTGGATTTACAGAAAAATTGAACAAAAGGAAGAG
CTTGGATTAACTGACATTGCGAAGGAGGAGGACAACAAACTTGCAGAAAAGATGATACTG
GTAAGCCTGTGGTGTATCCAAACCGTTCCGGCCAGCCGACCATCGATCAGTATGGTTATA
GAGATGTTACAAGGTGAAGTCGGATCATTGCAAATGCCTCCTAAGCCTTTTTTGTATTCT
CCTTCAAGGTCAGACAGAGACATGTCTACTAGTACTACTTATACGGTTTAG

Peptide Sequence

PEP ID

XP_016495839.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MASQMDIIVGNLTLFRCNNSLDINRGTNDHYFRDYKNYTECSGFSIYYKYPTTWREGYSD
APEGDIPNNCSLIQLPIKWRSQQLTQNSSLFDLLTANFTIQWSLSDDCSKCYNQGGRCLT
DSNNNFLCSSNPKVKRKSKRILAAATASSIGGVVILVILLLYLQTKCSLNSMIFWKKKGE
DYRNVKDFLKNCGSLAPRNYSYPEVKKMTEYFKNKLGQGGYGCVYKGKLHNGTLVAVKVL
KESKGGGEEFINEVASISRTSHINIVSLVGFCFEGQNKALIYDFMPNGSLEKFIYDAKSG
TNRQLGWQTLYNITLGIARGLEYLHRGCNTPILHFDIKPHNILLDEDFCPKISEFGLAKL
CNKKESIVSLLGARGTIGYIAPEIVCKNIGGVSHKSDVYSYGMMVLEMVGGRKNVDVAVD
RTSEIYFPHWIYRKIEQKEELGLTDIAKEEDNKLAEKMILVSLWCIQTVPASRPSISMVI
EMLQGEVGSLQMPPKPFLYSPSRSDRDMSTSTTYTV

Transcript Sequence

Gene sequence data has not been registered.